STRINGSTRING
HX89_11760 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_11760" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_11760Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (454 aa)    
Predicted Functional Partners:
HX89_11765
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
         
  0.848
HX89_11770
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
              0.707
HX89_06560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
   
          0.639
HX89_05055
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
   
          0.620
HX89_11750
RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family (324 aa)
              0.607
cysS
Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family (483 aa)
              0.598
HX89_00405
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
   
          0.585
HX89_02125
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (359 aa)
   
          0.555
HX89_08225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.543
HX89_11210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (522 aa)
   
          0.536
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (6%) [HD]