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HX89_11860 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_11860" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_11860Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)    
Predicted Functional Partners:
HX89_11855
Asparaginase; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
              0.570
dtd
D-aminoacyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl- tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA-based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality; Belongs to the DTD family (151 aa)
              0.570
HX89_00045
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
   
          0.506
AIF39656.1
Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
   
          0.506
HX89_02335
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
   
          0.490
HX89_14330
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
   
          0.437
HX89_11845
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
              0.429
HX89_11840
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
              0.429
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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