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hemL protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"hemL" - Glutamate-1-semialdehyde 2,1-aminomutase in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde 2,1-aminomutase; Derived by automated computational analysis using gene prediction method- Protein Homology (443 aa)    
Predicted Functional Partners:
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the glutamyl-tRNA reductase family (433 aa)
 
  0.995
HX89_12375
Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ALAD family (321 aa)
 
 
  0.993
HX89_12380
Uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
 
 
  0.958
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family (327 aa)
 
   
  0.931
HX89_12325
Cytochrome C biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method- Protein Homology (359 aa)
   
   
  0.909
HX89_12330
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
   
   
  0.906
HX89_12340
Redoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
   
  0.904
HX89_12345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
   
        0.892
HX89_12335
Cytochrome C biogenesis protein ResC; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
        0.860
HX89_12320
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (82 aa)
              0.856
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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