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HX89_12430 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12430" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
HX89_12430Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (268 aa)    
Predicted Functional Partners:
HX89_12435
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
   
        0.890
HX89_12440
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
              0.801
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (269 aa)
   
        0.787
HX89_12425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
              0.709
HX89_12445
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
              0.695
HX89_09520
Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
        0.643
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (459 aa)
              0.499
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (940 aa)
              0.468
HX89_00705
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
   
          0.452
HX89_05310
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
   
   
  0.444
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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