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HX89_12445 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12445" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_12445Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)    
Predicted Functional Partners:
HX89_12435
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
        0.746
HX89_12430
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (268 aa)
              0.695
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (269 aa)
   
        0.639
HX89_12440
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
              0.602
HX89_07555
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
          0.592
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (459 aa)
              0.582
HX89_04325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
   
        0.563
HX89_12425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
              0.494
HX89_06345
Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (539 aa)
   
          0.476
HX89_01730
Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
   
          0.444
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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