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HX89_12835 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12835" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
HX89_12835Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (765 aa)    
Predicted Functional Partners:
HX89_05905
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (604 aa)
 
 
  0.844
HX89_09395
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (376 aa)
 
 
  0.797
HX89_05925
Cell division protein FtsW; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (417 aa)
 
 
  0.790
HX89_00775
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)
 
  0.781
lysS
Lysine--tRNA ligase; Catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family (1108 aa)
         
  0.690
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family (373 aa)
   
 
  0.683
HX89_00780
Cell division protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SEDS family (459 aa)
 
 
  0.677
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily (366 aa)
 
   
  0.671
HX89_06195
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (673 aa)
     
 
  0.669
mraY
Phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily (363 aa)
 
     
  0.664
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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