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HX89_12975 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_12975" - FAD-linked oxidase in Dermacoccus nishinomiyaensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_12975FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (451 aa)    
Predicted Functional Partners:
HX89_09680
Malate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the malate synthase family (545 aa)
   
 
  0.933
HX89_02320
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (693 aa)
     
  0.915
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily (723 aa)
   
 
  0.909
HX89_09675
Isocitrate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
         
  0.903
HX89_02175
Phosphate acetyltransferase; Involved in acetate metabolism; In the N-terminal section; belongs to the CobB/CobQ family (691 aa)
         
  0.656
HX89_05565
Fe-S osidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
   
  0.616
HX89_10475
L-lactate permease; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
   
   
  0.491
HX89_12970
Sodium-solute symporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (544 aa)
              0.447
HX89_06120
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
     
 
  0.407
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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