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HX89_13300 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_13300" - Fatty acid desaturase in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_13300Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)    
Predicted Functional Partners:
HX89_13295
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
   
  0.912
HX89_05585
Stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
   
  0.843
HX89_05590
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
   
   
 
0.809
HX89_05580
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
   
          0.594
HX89_13305
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (212 aa)
              0.433
HX89_09210
Thioesterase; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
 
          0.424
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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