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HX89_13440 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_13440" - Iron ABC transporter substrate-binding protein in Dermacoccus nishinomiyaensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_13440Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)    
Predicted Functional Partners:
HX89_13425
Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
 
  0.997
HX89_13430
Enterobactin ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (351 aa)
 
  0.989
HX89_13435
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (341 aa)
 
  0.987
HX89_07580
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
         
    0.800
HX89_08275
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (340 aa)
         
  0.675
HX89_09670
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (512 aa)
   
     
  0.656
HX89_07440
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1262 aa)
 
          0.623
HX89_07935
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
         
  0.590
HX89_07940
Magnesium chelatase; Derived by automated computational analysis using gene prediction method- Protein Homology (714 aa)
              0.582
HX89_07915
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the precorrin methyltransferase family (525 aa)
   
   
  0.575
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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