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HX89_13560 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_13560" - Thioredoxin in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
HX89_13560Thioredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)    
Predicted Functional Partners:
HX89_13565
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (305 aa)
              0.549
dnaK
Chaperone protein DnaK; Acts as a chaperone (628 aa)
 
 
  0.538
HX89_04950
Thioredoxin reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (569 aa)
 
 
  0.519
HX89_13885
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family (142 aa)
 
 
  0.516
HX89_08145
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1511 aa)
       
      0.508
HX89_01345
Rhodanese; Derived by automated computational analysis using gene prediction method- Protein Homology (106 aa)
 
 
  0.504
HX89_01225
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
   
 
  0.494
HX89_11625
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (545 aa)
   
 
  0.459
HX89_10975
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (537 aa)
   
 
  0.459
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily (1502 aa)
   
 
  0.458
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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