STRINGSTRING
HX89_13635 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_13635" - Membrane protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_13635Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)    
Predicted Functional Partners:
HX89_04595
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (859 aa)
 
   
  0.835
HX89_02480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
   
 
      0.607
HX89_07590
MFS transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (428 aa)
   
 
      0.600
HX89_11515
MFS transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (397 aa)
   
 
      0.598
HX89_13640
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
              0.557
HX89_13645
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (560 aa)
              0.555
HX89_13200
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
 
 
      0.532
HX89_13680
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
 
     
  0.493
HX89_02100
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (351 aa)
   
          0.485
HX89_02010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
   
 
      0.477
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
Server load: low (12%) [HD]