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HX89_14545 protein (Dermacoccus nishinomiyaensis) - STRING interaction network
"HX89_14545" - Uncharacterized protein in Dermacoccus nishinomiyaensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HX89_14545Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (571 aa)    
Predicted Functional Partners:
HX89_14555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (510 aa)
 
          0.901
HX89_14560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (509 aa)
 
          0.846
HX89_14540
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
              0.731
HX89_14550
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (61 aa)
              0.703
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (826 aa)
   
 
  0.468
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (440 aa)
     
 
  0.461
HX89_10390
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
     
 
  0.456
HX89_09310
Glucosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (376 aa)
     
 
  0.456
HX89_08145
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1511 aa)
              0.402
Your Current Organism:
Dermacoccus nishinomiyaensis
NCBI taxonomy Id: 1274
Other names: ATCC 29093, CCM 2140, CCUG 33028, CIP 81.71, D. nishinomiyaensis, DSM 20448, Dermacoccus nishinomiyaensis, Dermacoccus nishinomiyensis, Dermatococcus nishinomiyaensis, Dermatococcus nishinomiyensis, IEGM 393, IFO 15356, JCM 11613, LMG 14222, Micrococcus nishinomiyaensis, Micrococcus nishinomyaensis, NBRC 15356, NCTC 11039
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