STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGR41850.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
tpx
Thiol peroxidase; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.538
AGR41848.1
ATPase AAA-2 domain-containing protein.
       0.492
AGR41845.1
Superfamily I DNA/RNA helicase.
       0.486
AGR41846.1
Hypothetical protein.
       0.486
AGR41847.1
Hypothetical protein.
       0.486
Your Current Organism:
Spiroplasma diminutum
NCBI taxonomy Id: 1276221
Other names: S. diminutum CUAS-1, Spiroplasma diminutum ATCC 49235, Spiroplasma diminutum CUAS-1
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