STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC44487.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AGC44483.1
Hypothetical protein.
 
 
 0.967
AGC44490.1
Hypothetical protein.
 
  
 0.947
AGC44489.1
Hypothetical protein.
 
  
 0.912
AGC44486.1
Gpw/Gp25 family protein.
  
  
 0.860
AGC41453.1
Hypothetical protein.
 
  
 0.843
AGC44482.1
Hypothetical protein.
  
  
 0.818
AGC44485.1
Hypothetical protein.
       0.807
AGC44480.1
Hypothetical protein.
  
  
 0.770
AGC47248.1
Hypothetical protein.
  
    0.765
AGC44478.1
Hypothetical protein.
  
    0.760
Your Current Organism:
Myxococcus stipitatus
NCBI taxonomy Id: 1278073
Other names: M. stipitatus DSM 14675, Myxococcus stipitatus DSM 14675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.