STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR02319.1Putative transmembrane transcriptional regulator (anti-sigma factor). (441 aa)    
Predicted Functional Partners:
EMR04439.1
Outer membrane receptor for ferrienterochelin and colicin.
 
 
0.950
oprF_1
Root adhesin.
   
 
 0.851
oprF_2
Outer membrane porin F precursor.
   
 
 0.851
EMR02320.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.834
EMR01311.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.822
EMR01211.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.817
EMR02370.1
Hypothetical protein.
  
 
   0.789
EMR01724.1
Catecholate siderophore receptor CirA.
  
   0.783
EMR01474.1
Outer membrane receptor for ferrienterochelin and colicin.
  
   0.783
EMR02599.1
Outer membrane receptor FepA.
  
   0.773
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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