STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000424545_03328Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000424545_02647
Unannotated protein.
  
     0.741
GCA_000424545_01411
Unannotated protein.
  
     0.681
GCA_000424545_02591
Unannotated protein.
  
     0.660
GCA_000424545_00538
Unannotated protein.
  
     0.546
GCA_000424545_01871
Unannotated protein.
  
     0.546
GCA_000424545_03297
Unannotated protein.
  
     0.516
GCA_000424545_00556
Unannotated protein.
  
     0.505
GCA_000424545_01981
Unannotated protein.
  
     0.502
GCA_000424545_00480
Unannotated protein.
  
     0.499
GCA_000424545_01984
Unannotated protein.
 
     0.452
Your Current Organism:
Butyrivibrio sp. NC3005
NCBI taxonomy Id: 1280685
Other names: B. sp. NC3005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.