STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421465_03023Unannotated protein. (210 aa)    
Predicted Functional Partners:
GCA_000421465_02225
Unannotated protein.
    
   0.881
GCA_000421465_03024
Unannotated protein.
     
 0.807
GCA_000421465_03022
Unannotated protein.
  
    0.800
GCA_000421465_02176
Unannotated protein.
    
   0.797
GCA_000421465_03026
Unannotated protein.
   
   0.796
GCA_000421465_03025
Unannotated protein.
       0.773
GCA_000421465_03018
Unannotated protein.
       0.691
GCA_000421465_03019
Unannotated protein.
       0.691
GCA_000421465_03020
Unannotated protein.
       0.686
GCA_000421465_03021
Unannotated protein.
       0.686
Your Current Organism:
Methylohalobius crimeensis
NCBI taxonomy Id: 1283300
Other names: M. crimeensis 10Ki, Methylohalobius crimeensis 10Ki, Methylohalobius crimeensis DSM 16011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.