STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP400E1A-binding protein p400. (3110 aa)    
Predicted Functional Partners:
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.988
Y956_04964
Actin-like 6A; Belongs to the actin family.
    
 0.983
Y956_05747
Primary ciliary dyskinesia protein 1.
    
 
 0.977
ACTR6
Actin-related protein 6; Belongs to the actin family.
    
 
 0.969
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.966
VPS72
Vacuolar protein sorting-associated protein 72.
    
 0.958
YEATS4
YEATS domain-containing protein 4.
    
 0.950
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
    
 
 0.882
Y956_02297
Histone H2A; Belongs to the histone H2A family.
    
 0.872
Y956_00953
Histone H2A; Belongs to the histone H2A family.
    
 0.872
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.