STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCND1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)    
Predicted Functional Partners:
CDK6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.997
RB1
Retinoblastoma-associated protein.
    
 0.991
CDKN1B
Cyclin-dependent kinase inhibitor 1B.
   
 0.977
Y956_09107
Cyclin-dependent kinase inhibitor 1.
   
 0.977
CDKN1A
Cyclin-dependent kinase inhibitor 1.
   
 0.977
RBL2
Retinoblastoma-like 2.
    
 0.967
CDKN2C
Cyclin-dependent kinase 4 inhibitor C.
    
 0.963
GSK3B
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.962
CCND2
G1/S-specific cyclin-D2; Belongs to the cyclin family.
  
  
0.924
CCND3
G1/S-specific cyclin-D3; Belongs to the cyclin family.
  
  
0.924
Your Current Organism:
Nipponia nippon
NCBI taxonomy Id: 128390
Other names: Ibis nippon, N. nippon, crested ibis
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