STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA1_48610Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)    
Predicted Functional Partners:
WA1_23005
NblA-related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
WA1_24955
Phycobilisome degradation family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
WA1_12150
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.670
WA1_14320
Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]
  
     0.654
WA1_44170
Phycobilisome linker polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.640
WA1_36655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
WA1_01115
CRISPR-associated protein Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
WA1_40370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
WA1_22010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
WA1_28605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
Your Current Organism:
Scytonema hofmannii
NCBI taxonomy Id: 128403
Other names: S. hofmannii PCC 7110, Scytonema hofmannii PCC 7110, Scytonema sp. ATCC 29171, Scytonema sp. PCC 7110
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.