STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC37954.1alpha-L-fucosidase. (474 aa)    
Predicted Functional Partners:
SDC37986.1
Protein of unknown function.
       0.608
SDD78348.1
Alpha-L-fucosidase.
  
  
  0.516
SDC38020.1
Protein of unknown function.
       0.502
SDE10498.1
alpha-L-fucosidase.
 
  
 
0.445
SDD32660.1
Alpha-L-fucosidase.
  
 
0.438
SDE16082.1
alpha-L-fucosidase.
  
 
0.433
SDC38053.1
Starch-binding associating with outer membrane.
       0.425
SDD00005.1
alpha-L-fucosidase.
  
  
 
0.424
SDD31645.1
alpha-L-fucosidase.
  
  
 
0.418
SDC38076.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.413
Your Current Organism:
Niabella drilacis
NCBI taxonomy Id: 1285928
Other names: CCM 8410, DSM 25811, LMG 26954, LMG:26954, N. drilacis, Niabella drilacis Glaeser et al. 2013, Niabella sp. E90, strain E90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.