STRINGSTRING
rocA protein (Staphylococcus xylosus) - STRING interaction network
"rocA" - annotation not available in Staphylococcus xylosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rocAannotation not available (514 aa)    
Predicted Functional Partners:
AID42469.1
annotation not available (333 aa)
  0.993
AID43248.1
Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde (396 aa)
  0.992
AID41670.1
Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde (396 aa)
 
  0.961
AID43247.1
annotation not available (414 aa)
   
  0.942
AID43604.1
annotation not available (414 aa)
   
  0.941
AID43726.1
annotation not available (1500 aa)
   
 
  0.920
AID42483.1
D-alanine aminotransferase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction (281 aa)
     
  0.918
AID42923.1
annotation not available (446 aa)
   
 
  0.907
AID41548.1
annotation not available (463 aa)
   
 
  0.906
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (271 aa)
       
  0.904
Your Current Organism:
Staphylococcus xylosus
NCBI taxonomy Id: 1288
Other names: ATCC 29971, CCUG 7324, CIP 81.66, DSM 20266, HAMBI 2057, JCM 2418, NCTC 11043, NRRL B-14776, S. xylosus, Staphylococcus xylosus
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