STRINGSTRING
AID42669.1 protein (Staphylococcus xylosus) - STRING interaction network
"AID42669.1" - annotation not available in Staphylococcus xylosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AID42669.1annotation not available (139 aa)    
Predicted Functional Partners:
AID42668.1
annotation not available (286 aa)
       
  0.947
AID42667.1
annotation not available (257 aa)
   
   
  0.914
nfo
Probable endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5’-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin (296 aa)
 
        0.718
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (323 aa)
         
  0.526
cshB
DEAD-box ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures (446 aa)
              0.521
sodA
Superoxide dismutase [Mn/Fe]; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Also contributes to the inhibition of lipid oxidation. Manganese-preferring enzyme, less active with iron than with manganese; Belongs to the iron/manganese superoxide dismutase family (199 aa)
   
   
  0.512
AID43087.1
annotation not available (570 aa)
         
  0.475
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (876 aa)
         
  0.426
Your Current Organism:
Staphylococcus xylosus
NCBI taxonomy Id: 1288
Other names: ATCC 29971, CCUG 7324, CIP 81.66, DSM 20266, HAMBI 2057, JCM 2418, NCTC 11043, NRRL B-14776, S. xylosus, Staphylococcus xylosus
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