Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
annotation not available (372 aa)
Predicted Functional Partners:
Scaffolding protein; FIG01108403 (85 aa)
Uncharacterized protein; FIG01226173; Belongs to the UPF0403 family (144 aa)
annotation not available (210 aa)
annotation not available (171 aa)
Uncharacterized protein; Homology with BH3430 (143 aa)
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (513 aa)
annotation not available (276 aa)
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (296 aa)
Putative phosphoesterase AST15_09180; Homology with Bsu1186 (yjcG); Belongs to the 2H phosphoesterase superfamily. YjcG family (169 aa)