STRINGSTRING
AID42867.1 protein (Staphylococcus xylosus) - STRING interaction network
"AID42867.1" - TCDB 3.A.1.2.1 in Staphylococcus xylosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AID42867.1TCDB 3.A.1.2.1 (129 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter permease; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family (314 aa)
 
 
  0.998
AID42864.1
D-ribose ABC transporter substrate-binding protein; TCDB 3.A.1.2.1 (304 aa)
 
   
  0.985
AID42866.1
Sugar ABC transporter ATP-binding protein; TCDB 3.A.1.2.1 (496 aa)
 
   
  0.975
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (287 aa)
   
  0.975
AID42868.1
annotation not available (261 aa)
 
     
  0.918
glcU
Glucose uptake protein GlcU; Involved in the uptake of glucose (285 aa)
   
   
  0.475
rlmN
Probable dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (364 aa)
         
  0.435
Your Current Organism:
Staphylococcus xylosus
NCBI taxonomy Id: 1288
Other names: ATCC 29971, CCUG 7324, CIP 81.66, DSM 20266, HAMBI 2057, JCM 2418, NCTC 11043, NRRL B-14776, S. xylosus, Staphylococcus xylosus
Server load: low (13%) [HD]