STRINGSTRING
AID43134.1 protein (Staphylococcus xylosus) - STRING interaction network
"AID43134.1" - UPF0356 protein AST15_08265 in Staphylococcus xylosus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AID43134.1UPF0356 protein AST15_08265; DUF1447; Belongs to the UPF0356 family (71 aa)    
Predicted Functional Partners:
AID43135.1
Ribonuclease J; An RNase that has 5’-3’ exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily (628 aa)
         
  0.859
AID42490.1
Uncharacterized protein; Homology with SAV1743 (287 aa)
   
          0.766
AID43213.1
annotation not available (262 aa)
   
          0.740
AID42809.1
Uncharacterized protein; FIG01108295 (67 aa)
   
          0.734
lipL
Octanoyl-[GcvH]-protein N-octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family (278 aa)
   
          0.719
AID42306.1
annotation not available (247 aa)
   
          0.653
AID43096.1
DNA-binding protein; COG1399 (182 aa)
   
          0.647
AID43689.1
annotation not available (132 aa)
   
          0.639
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (70 aa)
   
     
  0.634
AID42448.1
Nucleoside triphosphatase; 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family (158 aa)
   
          0.623
Your Current Organism:
Staphylococcus xylosus
NCBI taxonomy Id: 1288
Other names: ATCC 29971, CCUG 7324, CIP 81.66, DSM 20266, HAMBI 2057, JCM 2418, NCTC 11043, NRRL B-14776, S. xylosus, Staphylococcus xylosus
Server load: low (7%) [HD]