STRINGSTRING
AID43708.1 protein (Staphylococcus xylosus) - STRING interaction network
"AID43708.1" - Uncharacterized protein in Staphylococcus xylosus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AID43708.1Uncharacterized protein; COG2827 (82 aa)    
Predicted Functional Partners:
AID43709.1
Uncharacterized protein; COG4123 (241 aa)
            0.976
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (277 aa)
              0.901
AID43712.1
annotation not available (307 aa)
         
  0.720
AID43710.1
Initiation-control protein YabA; Involved in initiation control of chromosome replication (113 aa)
              0.718
AID43711.1
annotation not available (267 aa)
              0.707
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily (659 aa)
              0.625
AID43713.1
annotation not available (109 aa)
              0.595
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (205 aa)
              0.580
AID43715.1
Lysine decarboxylase (447 aa)
              0.577
AID43705.1
annotation not available (257 aa)
              0.449
Your Current Organism:
Staphylococcus xylosus
NCBI taxonomy Id: 1288
Other names: ATCC 29971, CCUG 7324, CIP 81.66, DSM 20266, HAMBI 2057, JCM 2418, NCTC 11043, NRRL B-14776, S. xylosus, Staphylococcus xylosus
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