STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMP54301.1Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (149 aa)    
Predicted Functional Partners:
EMP54302.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein.
       0.540
EMP54303.1
Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.535
EMP55666.1
Hypothetical protein.
  
     0.526
EMP54306.1
Hypothetical protein; COG5621 Predicted secreted hydrolase.
       0.517
EMP54304.1
Lipoprotein-releasing system ATP-binding protein LolD; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
       0.508
EMP54305.1
Membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
       0.508
EMP54693.1
COG0531 Amino acid transporters.
 
   
 0.499
Your Current Organism:
Marinobacter santoriniensis
NCBI taxonomy Id: 1288826
Other names: M. santoriniensis NKSG1, Marinobacter santoriniensis NKSG1, Marinobacter sp. NKSG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.