STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ72957.1Conserved protein of unknown function [TPR domains]; Homologs of previously reported genes of unknown function. (565 aa)    
Predicted Functional Partners:
CCQ72958.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.757
CCQ72959.1
Putative SAM-dependent methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
 
 0.617
CCQ72956.1
Putative High-affinity nickel/cobalt-transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.601
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.580
CCQ74207.1
Putative WD-40 repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.567
htpG
Molecular chaperone HSP90 family; Molecular chaperone. Has ATPase activity.
   
 0.559
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
    0.535
CCQ73556.1
Putative Flp pilus assembly protein TadD, contains TPR repeat; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
   0.507
CCQ74171.1
Putative GT41 : related to UDP-GlcNAc : protein O-b-N-acetylglucosaminyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.412
CCQ72878.1
Conserved Protein of unknown function containing tetratrico peptide repeat region (TPR); Homologs of previously reported genes of unknown function.
 
 
0.408
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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