STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCQ74311.1Conserved protein of unknown function. Containing FAD dependent oxidoreductase domain; Homologs of previously reported genes of unknown function. (397 aa)    
Predicted Functional Partners:
dat
D-alanine aminotransferase; Function of strongly homologous gene; enzyme.
     
 0.906
thiG
Thiazole biosynthesis protein thiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.854
CCQ72138.1
NAD(FAD)-dependent dehydrogenases; Function of strongly homologous gene; enzyme.
 
 
 0.831
gcvT
Glycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme.
  
 
 0.782
CCQ74312.1
Protein of unknown function; No homology to any previously reported sequences.
  
    0.698
fccB
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
fccB-2
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
soxF
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain; Function of strongly homologous gene; enzyme.
  
 
 0.694
gltB
Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.589
CCQ74433.1
Putative alanine racemase (alr); Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.559
Your Current Organism:
Magnetospira sp. QH2
NCBI taxonomy Id: 1288970
Other names: M. sp. QH-2, Magnetospira sp. QH-2, marine magnetic spirillum QH-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.