STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM54323.1Hypothetical protein. (640 aa)    
Predicted Functional Partners:
KRM56104.1
Thioredoxin.
  
 0.666
KRM55718.1
Hypothetical protein.
  
     0.593
KRM56478.1
Hypothetical protein.
  
 0.591
KRM54375.1
Glutathione reductase.
  
 0.544
KRM55918.1
Hypothetical protein.
  
     0.524
KRM56472.1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.485
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis; Belongs to the aspartate/glutamate racemases family.
  
    0.467
KRM54322.1
Phosphoesterase.
       0.449
KRM56330.1
Hypothetical protein.
  
     0.428
KRM56129.1
Nucleotide deoxyribosyltransferase.
  
     0.403
Your Current Organism:
Lactobacillus sharpeae
NCBI taxonomy Id: 1291052
Other names: L. sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae DSM 20505, Lactobacillus sharpeae JCM 1186 = DSM 20505, Lactobacillus sharpeae LMG 9214, Lactobacillus sharpeae NCIB 11720
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.