STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAP86305.1Signal transduction histidine kinase; Gene_1725; identified by MetaGeneAnnotator; putative. (299 aa)    
Predicted Functional Partners:
BAP86306.1
Two-component response regulator; Gene_1726; identified by MetaGeneAnnotator; putative.
 
 
 0.977
BAP86285.1
DNA binding site [nucleotide binding]; Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and..; cd00383; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; COG0745; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eu [...]
 
 
 0.837
BAP84827.1
PhoB family transcriptional regulator; DNA binding site [nucleotide binding]; Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and..; cd00383; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; COG0745; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, a [...]
 
 
 0.817
phoP
Two-component response regulator; Gene_1635; identified by MetaGeneAnnotator; putative.
 
 
 0.805
BAP84602.1
Two-component response regulator; DNA binding site [nucleotide binding]; Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and..; cd00383; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; COG0745; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and Ph [...]
 
 
 0.803
BAP85454.1
Two-component response regulator; DNA binding site [nucleotide binding]; Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and..; cd00383; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; COG0745; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and Ph [...]
 
 
 0.775
BAP86303.1
ABC transporter; Gene_1723; identified by MetaGeneAnnotator; putative.
 
    0.771
BAP86137.1
Two-component response regulator; DNA binding site [nucleotide binding]; Effector domain of response regulator. Bacteria and certain eukaryotes like protozoa and higher plants use two-component signal transduction systems to detect and respond to changes in the environment. The system consists of a sensor histidine kinase and..; cd00383; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; COG0745; Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and Ph [...]
 
 
 0.735
BAP86377.1
Two-component response regulator; Gene_1797; identified by MetaGeneAnnotator; putative.
 
 
 0.722
BAP85331.1
Cell surface protein; Gene_751; identified by MetaGeneAnnotator; putative; partial.
  
     0.651
Your Current Organism:
Lactobacillus hokkaidonensis
NCBI taxonomy Id: 1291742
Other names: L. hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis JCM 18461, Lactobacillus hokkaidonensis LOOC260, Lactobacillus sp. LOOC260
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.