node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
efp | rplT | LOSG293_010400 | LOSG293_010920 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.986 |
efp | rplU | LOSG293_010400 | LOSG293_010440 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
efp | rpmA | LOSG293_010400 | LOSG293_010420 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L27; Validated; PRK05435; KEGG: apb:SAR116_1855 6.1e-19 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; gene_42; identified by MetaGeneAnnotator; putative; ribosomal protein L27 [Lactobacillus parafarraginis F0439]; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
efp | rpmB | LOSG293_010400 | LOSG293_010140 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L28 [Lactobacillus rhamnosus GG]; 50S ribosomal protein L28; Reviewed; PRK00359; gene_14; identified by MetaGeneAnnotator; putative; strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103; Belongs to the bacterial ribosomal protein bL28 family. | 0.995 |
efp | rpmF | LOSG293_010400 | LOSG293_010820 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L32 [Bacillus licheniformis DSM 13 = ATCC 14580]; 50S ribosomal protein L32; Reviewed; PRK12286; gene_81; identified by MetaGeneAnnotator; putative; some L32 proteins have zinc finger motifs consisting of CXXC while others do not. | 0.991 |
efp | rpmI | LOSG293_010400 | LOSG293_010930 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L35 [Lactobacillus brevis ATCC 367]; 50S ribosomal protein L35; Reviewed; PRK00172; gene_92; identified by MetaGeneAnnotator; putative; Belongs to the bacterial ribosomal protein bL35 family. | 0.989 |
efp | rpsL | LOSG293_010400 | LOSG293_180320 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
efp | rpsO | LOSG293_010400 | LOSG293_030880 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
efp | rpsT | LOSG293_010400 | LOSG293_030870 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.992 |
efp | tuf | LOSG293_010400 | LOSG293_030910 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.476 |
rplT | efp | LOSG293_010920 | LOSG293_010400 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.986 |
rplT | rplU | LOSG293_010920 | LOSG293_010440 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplT | rpmA | LOSG293_010920 | LOSG293_010420 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 50S ribosomal protein L27; Validated; PRK05435; KEGG: apb:SAR116_1855 6.1e-19 ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; gene_42; identified by MetaGeneAnnotator; putative; ribosomal protein L27 [Lactobacillus parafarraginis F0439]; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplT | rpmB | LOSG293_010920 | LOSG293_010140 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 50S ribosomal protein L28 [Lactobacillus rhamnosus GG]; 50S ribosomal protein L28; Reviewed; PRK00359; gene_14; identified by MetaGeneAnnotator; putative; strain coidentity: ATCC 53103 = GG; synonym: Lactobacillus rhamnosus ATCC 53103; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
rplT | rpmF | LOSG293_010920 | LOSG293_010820 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 50S ribosomal protein L32 [Bacillus licheniformis DSM 13 = ATCC 14580]; 50S ribosomal protein L32; Reviewed; PRK12286; gene_81; identified by MetaGeneAnnotator; putative; some L32 proteins have zinc finger motifs consisting of CXXC while others do not. | 0.999 |
rplT | rpmI | LOSG293_010920 | LOSG293_010930 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 50S ribosomal protein L35 [Lactobacillus brevis ATCC 367]; 50S ribosomal protein L35; Reviewed; PRK00172; gene_92; identified by MetaGeneAnnotator; putative; Belongs to the bacterial ribosomal protein bL35 family. | 0.999 |
rplT | rpsL | LOSG293_010920 | LOSG293_180320 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rplT | rpsO | LOSG293_010920 | LOSG293_030880 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplT | rpsT | LOSG293_010920 | LOSG293_030870 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.999 |
rplT | tuf | LOSG293_010920 | LOSG293_030910 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.999 |