STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425625_01657Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_000425625_03788
Unannotated protein.
 0.962
GCA_000425625_04454
Unannotated protein.
 
 0.962
GCA_000425625_00295
Unannotated protein.
 
 0.936
GCA_000425625_01656
Unannotated protein.
 
     0.930
GCA_000425625_01162
Unannotated protein.
   
 0.865
GCA_000425625_03206
Unannotated protein.
  
 0.837
GCA_000425625_01428
Unannotated protein.
   
 0.826
GCA_000425625_02087
Unannotated protein.
   
 0.826
GCA_000425625_02853
Unannotated protein.
   
 0.826
GCA_000425625_04457
Unannotated protein.
  
 0.811
Your Current Organism:
Pseudomonas azotifigens
NCBI taxonomy Id: 1292027
Other names: P. azotifigens DSM 17556, Pseudomonas azotifigens DSM 17556
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.