STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM05155.1Sarcosine oxidase delta subunit. (106 aa)    
Predicted Functional Partners:
AHM05156.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
 0.999
AHM05157.1
Sarcosine oxidase gamma subunit.
 
 0.999
AHM05151.1
Sarcosine oxidase beta subunit.
 
 0.994
AHM02831.1
Sarcosine dehydrogenase; Belongs to the GcvT family.
 
 0.993
AHM04975.1
Sarcosine dehydrogenase; Belongs to the GcvT family.
 
 0.986
AHM04159.1
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
 
 0.973
AHM05328.1
Sarcosine dehydrogenase.
 
 0.939
AHM04064.1
Creatinase.
  
  
  0.918
AHM05076.1
Serine hydroxymethyltransferase.
  
 
  0.911
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
  0.911
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.