STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT57796.1Rieske 2Fe-2S family protein. (373 aa)    
Predicted Functional Partners:
SFT57737.1
Sarcosine oxidase subunit alpha.
 
 
 0.920
SFT57715.1
Dimethylglycine oxidase; Belongs to the GcvT family.
 
 
 0.887
SFT57820.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
 
  
 0.868
SFT50662.1
NAD(P)H-flavin reductase; Belongs to the globin family.
  
 
 0.853
SFT57830.1
Reductase C-terminal.
  
  0.834
SFT65822.1
Ferredoxin-NADP reductase.
 
 
 0.802
SFT99324.1
Ferredoxin-NADP reductase.
  
 
 0.802
SFU06016.1
ferredoxin--NADP+ reductase.
 
  
  0.797
SFT50606.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.773
SFT57497.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 
 0.770
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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