STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT58204.1Cu+-exporting ATPase. (786 aa)    
Predicted Functional Partners:
SFT58239.1
Copper ion binding protein.
 
 
 0.861
SFT87106.1
Copper chaperone CopZ.
 
 
 0.811
SFU03520.1
Copper chaperone CopZ.
 
 
 0.804
SFT94798.1
Copper ion binding protein.
 
 
 0.791
SFU03505.1
Cu+-exporting ATPase.
 
 
0.776
SFT87067.1
Cu+-exporting ATPase.
 
 
0.774
SFT58216.1
Hypothetical protein.
   
 0.765
SFU03534.1
Heavy-metal-associated domain-containing protein.
  
 
 0.689
SFT58227.1
DNA-binding transcriptional regulator, FrmR family.
 
  
 0.685
SFT58194.1
Cu2+-exporting ATPase.
 
    
0.625
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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