STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425985_01007Unannotated protein. (116 aa)    
Predicted Functional Partners:
GCA_000425985_01393
Unannotated protein.
    
   0.833
GCA_000425985_01006
Unannotated protein.
       0.732
GCA_000425985_01005
Unannotated protein.
       0.570
GCA_000425985_01003
Unannotated protein.
       0.552
GCA_000425985_01004
Unannotated protein.
       0.552
GCA_000425985_03292
Unannotated protein.
    
  0.490
GCA_000425985_01325
Unannotated protein.
    
  0.488
GCA_000425985_00997
Unannotated protein.
       0.481
GCA_000425985_00998
Unannotated protein.
       0.481
GCA_000425985_00999
Unannotated protein.
       0.481
Your Current Organism:
Microbacterium sp. URHA0036
NCBI taxonomy Id: 1298860
Other names: M. sp. URHA0036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.