STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002868Uncharacterized protein. (602 aa)    
Predicted Functional Partners:
J056_001970
Serine/threonine-protein phosphatase.
    
 0.613
J056_003298
SIT4-associating protein.
    
 0.598
J056_002278
Ankyrin repeat protein nuc-2.
   
 0.503
J056_000414
Ubiquitin-40S ribosomal protein S27a.
    
  0.496
J056_004619
Ubiquitin-like protein 1.
    
  0.466
J056_000078
Suppressor of kinetochore protein 1; Belongs to the SKP1 family.
   
 0.444
J056_001227
GTP-binding protein ypt1.
    
 0.442
J056_001311
Protein ras-2.
   
 0.437
J056_002256
24 kDa Ras-like protein.
   
 0.437
J056_003207
Polyubiquitin-A.
   
 0.433
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.