Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| J056_000234 | J056_000439 | R9AXQ5 | R9AEJ7 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Squalene monooxygenase. | 0.698 |
| J056_000234 | J056_001318 | R9AXQ5 | R9AD14 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.997 |
| J056_000234 | J056_001663 | R9AXQ5 | R9ABI4 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Squalene synthase. | 0.674 |
| J056_000234 | J056_001735 | R9AXQ5 | R9ABB2 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family. | 0.687 |
| J056_000234 | J056_002041 | R9AXQ5 | R9AP54 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Methylsterol monooxygenase; Belongs to the sterol desaturase family. | 0.544 |
| J056_000234 | J056_002244 | R9AXQ5 | R9AVM5 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.672 |
| J056_000234 | J056_002981 | R9AXQ5 | R9AMS1 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.996 |
| J056_000234 | J056_003278 | R9AXQ5 | R9ARL4 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate. | 0.972 |
| J056_000234 | J056_004479 | R9AXQ5 | R9AG34 | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase B, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family. | 0.915 |
| J056_000439 | J056_000234 | R9AEJ7 | R9AXQ5 | Squalene monooxygenase. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.698 |
| J056_000439 | J056_001318 | R9AEJ7 | R9AD14 | Squalene monooxygenase. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.922 |
| J056_000439 | J056_001663 | R9AEJ7 | R9ABI4 | Squalene monooxygenase. | Squalene synthase. | 0.992 |
| J056_000439 | J056_001735 | R9AEJ7 | R9ABB2 | Squalene monooxygenase. | Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family. | 0.984 |
| J056_000439 | J056_002041 | R9AEJ7 | R9AP54 | Squalene monooxygenase. | Methylsterol monooxygenase; Belongs to the sterol desaturase family. | 0.995 |
| J056_000439 | J056_002244 | R9AEJ7 | R9AVM5 | Squalene monooxygenase. | 3-hydroxy-3-methylglutaryl coenzyme A reductase. | 0.907 |
| J056_001318 | J056_000234 | R9AD14 | R9AXQ5 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.997 |
| J056_001318 | J056_000439 | R9AD14 | R9AEJ7 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Squalene monooxygenase. | 0.922 |
| J056_001318 | J056_001663 | R9AD14 | R9ABI4 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Squalene synthase. | 0.912 |
| J056_001318 | J056_001735 | R9AD14 | R9ABB2 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family. | 0.943 |
| J056_001318 | J056_002041 | R9AD14 | R9AP54 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Methylsterol monooxygenase; Belongs to the sterol desaturase family. | 0.901 |
page 1 of 4