STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000231Paired amphipathic helix protein pst1. (1418 aa)    
Predicted Functional Partners:
J056_001842
Uncharacterized protein.
   
 0.980
J056_000335
PHD-type domain-containing protein.
   
 
 0.979
J056_001066
Histone acetyltransferase type B subunit 2.
   
 0.949
J056_001652
Chromatin modification-related protein EAF3.
   
 0.940
J056_001718
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.922
J056_002350
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.922
J056_004658
SANT domain-containing protein.
   
 0.905
J056_000835
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 
  0.900
J056_003875
Histone deacetylase 3.
   
 0.893
J056_001379
Small nuclear ribonucleoprotein Sm D3.
     
  0.800
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.