STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000144Rho1 guanine nucleotide exchange factor 1. (2240 aa)    
Predicted Functional Partners:
J056_001914
GTP-binding protein rhoA.
    
 0.986
J056_001466
Rho1 guanine nucleotide exchange factor 1.
    
0.956
J056_003388
Rho1 guanine nucleotide exchange factor 1.
     
 
0.900
J056_001055
Rho-type GTPase-activating protein 1.
    
 
 0.800
J056_002151
GTP-binding protein RHO1.
    
 0.793
J056_001948
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.674
J056_000464
Cell division control protein 42-like protein.
   
 0.573
J056_003430
Uncharacterized protein.
    
 
 0.571
J056_000931
MAP kinase kinase kinase mkh1.
    
 
 0.565
J056_004785
Wiskott-Aldrich syndrome protein-like protein 1.
    
 0.561
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.