STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_1656Outer membrane efflux protein precursor. (452 aa)    
Predicted Functional Partners:
I595_1655
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.994
I595_1654
RND multidrug efflux transporter Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.965
I595_1041
RND family efflux transporter MFP subunit.
  
  0.951
I595_1039
Hypothetical protein.
  
  
 
0.895
I595_1040
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.874
I595_1657
TetR family transcriptional regulator.
       0.817
I595_2806
Putative outer membrane transport/efflux protein.
  
  
  0.765
I595_2641
RND efflux system, outer membrane lipoprotein CmeC.
  
  
 
0.750
I595_1246
Biotin/lipoyl attachment domain-containing protein.
  
  0.748
I595_229
Secretion protein HlyD family protein.
   
  0.703
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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