STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_30450Spermine oxidase. (489 aa)    
Predicted Functional Partners:
Gasu_03150
Spermidine synthase.
     
 0.926
Gasu_60030
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.926
Gasu_64640
Amine oxidase.
     
 0.910
Gasu_54570
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
     
 0.910
Gasu_49900
Amine oxidase.
     
 0.910
Gasu_63180
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.901
Gasu_48300
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
    
  0.901
Gasu_19210
Aldehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
    
  0.901
Gasu_14690
Uncharacterized protein.
   
 
  0.600
Gasu_61800
Ubiquitin-conjugating enzyme 29; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.571
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.