STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_45450Syntaxin 5 isoform 2; Belongs to the syntaxin family. (329 aa)    
Predicted Functional Partners:
Gasu_32930
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
    
 0.999
Gasu_10790
Protein transporter; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
Gasu_63800
Golgi SNAP receptor complex member 1.
    
 0.999
Gasu_47830
Vesicle transport protein SEC22; Belongs to the synaptobrevin family.
   
 0.999
Gasu_38430
Golgi SNAP receptor complex member 2.
   
 0.999
Gasu_37440
SNAP receptor/ protein transporter.
   
 0.999
Gasu_08750
Soluble NSF attachment protein.
    
 0.985
Gasu_35580
Syntaxin 6.
    
 0.939
Gasu_26230
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.925
Gasu_06800
Uso1_p115_head domain-containing protein.
    
 0.922
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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