STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_38930DNA ligase 4; Belongs to the ATP-dependent DNA ligase family. (913 aa)    
Predicted Functional Partners:
Gasu_12600
ATP-dependent DNA helicase 2 subunit 2 isoform 1.
   
 0.990
Gasu_28150
ATP-dependent DNA helicase 2 subunit 1 isoform 1.
  
 0.989
Gasu_03510
Cyclin-dependent protein kinase, putative.
    
 0.925
Gasu_42810
Bifunctional polynucleotide phosphatase/kinase.
  
 0.850
Gasu_35620
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.847
Gasu_38560
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.790
Gasu_04410
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.790
Gasu_42770
DNA ligase.
  
 0.789
Gasu_35680
DNA ligase.
  
0.789
Gasu_54170
Exonuclease 1.
  
 0.761
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.