STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_06340Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (235 aa)    
Predicted Functional Partners:
Gasu_41260
Sortilin.
     
 0.939
Gasu_11670
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
  
  
 
0.901
Gasu_62380
Syntaxin isoform 1; Belongs to the syntaxin family.
   
 0.785
Gasu_04380
Vacuolar protein sorting protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.741
Gasu_52940
Syntaxin 1B/2/3 isoform 1; Belongs to the syntaxin family.
    
 0.707
Gasu_13760
Syntaxin 1B/2/3; Belongs to the syntaxin family.
    
 0.707
Gasu_53100
Vacuolar protein sorting vps16, putative; Belongs to the VPS16 family.
    
 
 0.678
Gasu_35580
Syntaxin 6.
    
 0.560
Gasu_41890
AP-1 complex subunit gamma.
    
 0.545
Gasu_08750
Soluble NSF attachment protein.
    
 0.515
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.