STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_04240ATP-dependent RNA helicase. (442 aa)    
Predicted Functional Partners:
Gasu_42960
RRM domain-containing protein.
   
 0.999
Gasu_00680
THO complex subunit 2.
   
 0.991
Gasu_11380
SAP domain-containing protein.
   
 0.979
Gasu_58920
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
  
0.972
Gasu_53800
Uncharacterized protein.
   
 0.960
Gasu_31170
THO complex subunit 1.
   
 0.952
Gasu_50390
RNA-binding protein 8A isoform 2.
   
 0.952
Gasu_02830
Methyltransferase.
   
 0.946
Gasu_22090
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
   
 0.925
Gasu_08670
Transducin family protein / WD-40 repeat family protein.
    
 0.922
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.