Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Gasu_00270 | Gasu_01520 | M2X7X4 | M2XRC5 | Phosphoglycerate kinase. | Glycerate kinase. | 0.827 |
| Gasu_00270 | Gasu_20140 | M2X7X4 | M2X324 | Phosphoglycerate kinase. | Phosphoribulokinase. | 0.644 |
| Gasu_00270 | Gasu_34520 | M2X7X4 | M2W0C4 | Phosphoglycerate kinase. | Phosphoglycerate kinase. | 0.905 |
| Gasu_00270 | rbcL | M2X7X4 | M2VYZ6 | Phosphoglycerate kinase. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.909 |
| Gasu_01520 | Gasu_00270 | M2XRC5 | M2X7X4 | Glycerate kinase. | Phosphoglycerate kinase. | 0.827 |
| Gasu_01520 | Gasu_20140 | M2XRC5 | M2X324 | Glycerate kinase. | Phosphoribulokinase. | 0.818 |
| Gasu_01520 | Gasu_34520 | M2XRC5 | M2W0C4 | Glycerate kinase. | Phosphoglycerate kinase. | 0.827 |
| Gasu_01520 | rbcL | M2XRC5 | M2VYZ6 | Glycerate kinase. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.900 |
| Gasu_09490 | rbcL | M2Y778 | M2VYZ6 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.809 |
| Gasu_20140 | Gasu_00270 | M2X324 | M2X7X4 | Phosphoribulokinase. | Phosphoglycerate kinase. | 0.644 |
| Gasu_20140 | Gasu_01520 | M2X324 | M2XRC5 | Phosphoribulokinase. | Glycerate kinase. | 0.818 |
| Gasu_20140 | Gasu_34520 | M2X324 | M2W0C4 | Phosphoribulokinase. | Phosphoglycerate kinase. | 0.634 |
| Gasu_20140 | rbcL | M2X324 | M2VYZ6 | Phosphoribulokinase. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.909 |
| Gasu_24810 | rbcL | M2Y2A7 | M2VYZ6 | 3-methylcrotonoyl-CoA carboxylase alpha subunit. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.809 |
| Gasu_34520 | Gasu_00270 | M2W0C4 | M2X7X4 | Phosphoglycerate kinase. | Phosphoglycerate kinase. | 0.905 |
| Gasu_34520 | Gasu_01520 | M2W0C4 | M2XRC5 | Phosphoglycerate kinase. | Glycerate kinase. | 0.827 |
| Gasu_34520 | Gasu_20140 | M2W0C4 | M2X324 | Phosphoglycerate kinase. | Phosphoribulokinase. | 0.634 |
| Gasu_34520 | rbcL | M2W0C4 | M2VYZ6 | Phosphoglycerate kinase. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.909 |
| Gasu_36010 | rbcL | M2XG64 | M2VYZ6 | Propionyl-CoA carboxylase alpha chain. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.809 |
| Gasu_39450 | rbcL | M2XY41 | M2VYZ6 | 4-nitrophenyl phosphatase. | Ribulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. | 0.900 |
page 1 of 2