STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY94344.1Circadian clock protein KaiB; Decreases the phosphorylation of KaiC, a component of the main circadian regulator in cyanobacteria; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
OLY94343.1
KaiC 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.993
OLY94666.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.936
OLY94346.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
OLY94345.1
Circadian clock protein KaiB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.807
OLY94347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
OLY91586.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.694
BUE76_10150
Hypothetical protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.694
OLY93533.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.674
OLY90642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.650
OLY90573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.636
Your Current Organism:
Cnuella takakiae
NCBI taxonomy Id: 1302690
Other names: Bacteroidetes bacterium RG1-1, C. takakiae, CGMCC 1.12492, Cnuella takakiae Zhao et al. 2014, DSM 26897, strain RG1-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.